Yup, and that's the same issue that's happening with the diving --> run out at the bowlers end. Basically, just diving too early and when the animation is "completed" you're still outside the crease.
I think there's a problem with where the crease is visually and where the computer thinks it is, I had one where I comfortably made it home, only for the batsman to turn around and walk out of the crease with one foot and get run out, but that was at the bowlers end... only happened once and may well have just been an oddity.
There's definitely a disconnect with the diving-animation, I'm just not diving at all and that's solved most of the run-outs.